I believe it's some kind of bonus. If you were only given free DOS, you will have to install your own OS, which is not free. But by having an OS like Vista originally installed, you don't necessarily have to install another OS, which mean you've saved some money. And the good things is that the OS is guaranteed to be original. But when you want to upgrade the OS to higher version, then it's your choice.
It was already installed with Vista doesn't mean it's been used before. Don't worry.